Genome Engineering

Shapiro JA. 2009. Letting E. coli teach me about genome engineering, Genetics 183: 1205–1214

Shapiro JA. 2009. Mobile DNA and evolution in the 21st Century. Mobile DNA, in press

A signal-responsive (cognitive) systems view of the genome, lecture presented at a workshop on "Complexity of the Gene Concept," Santa Fe Institute, March 9-11, 2009

Revisiting the Central Dogma in the 21st Century, 2009, Ann NY Acad Sci 1178: 6-28; lecture presented to a workshop on Natural Genome Engineering & Natural Genome Editing, Salzburg, July 2-6, 2008

A Third Way (Alternatives to Creationism and Darwinism, 1997)

Natural Genetic Engineering and Adaptive Mutation (1997)

Genome Formatting for Computation and Function (2002)

Why Repetitive DNA is Essential to Genome Function (2005)

A 21st Century View of Evolution (2005)

Shapiro JA. 2006. Genome informatics: The role of DNA in cellular computations. Biological Theory 1(3): 288-301.

Contextualization and Classification of Natural Genetic Engineering Operators, lecture to the Evolutionary Computation Group, University of Essex, June 22, 2007

Barbara McClintock, a 21st Century Biologist, lecture to Botanical Society of America, Chicago, July 10, 2007

Lectures at FOGA 2007, Foundations of Genetic Algorithms IX, Mexico City, 8-11 January 2007


<>Lectures at the Institute for Theoretical Physics, UC Santa Barbara, March, 2001
Thinking about Genome System Architecture
Natural Genetic Engineering -- the Toolbox for Evolution: Prokaryotes
Natural Genetic Engineering -- The Toolbox for Evolution - Eukaryotes