[ James A. Shapiro ] James A. Shapiro

Viral Composites

(Edwards and Rohwer 2005; Suzan-Monti, La Scola et al. 2006; Chenard and Suttle 2008; Moreira and Brochier-Armanet 2008; Zauberman, Mutsafi et al. 2008; Colson and Raoult 2010; Filee and Chandler 2010; Forterre 2010; Moliner, Fournier et al. 2010; Raoult 2010; Raoult and Boyer 2010; Schoenfeld, Liles et al. 2010; Alperovitch-Lavy, Sharon et al. 2011; Boyer, Azza et al. 2011; Colson, Yutin et al. 2011; Huang, Wang et al. 2011; Sharon, Battchikova et al. 2011; Thompson, Zeng et al. 2011; Colson and Raoult 2012)




Alperovitch-Lavy, A., I. Sharon, et al. (2011). "Reconstructing a puzzle: existence of cyanophages containing both photosystem-I and photosystem-II gene suites inferred from oceanic metagenomic datasets." Environ Microbiol 13(1): 24-32. http://www.ncbi.nlm.nih.gov/pubmed/20649642.

Boyer, M., S. Azza, et al. (2011). "Mimivirus shows dramatic genome reduction after intraamoebal culture." Proc Natl Acad Sci U S A 108(25): 10296-10301. http://www.ncbi.nlm.nih.gov/pubmed/21646533.

Chenard, C. and C. A. Suttle (2008). "Phylogenetic diversity of sequences of cyanophage photosynthetic gene psbA in marine and freshwaters." Appl Environ Microbiol 74(17): 5317-5324. http://www.ncbi.nlm.nih.gov/pubmed/18586962.

Colson, P. and D. Raoult (2010). "Gene repertoire of amoeba-associated giant viruses." Intervirology 53(5): 330-343. http://www.ncbi.nlm.nih.gov/pubmed/20551685.

Colson, P. and D. Raoult (2012). "Lamarckian evolution of the giant Mimivirus in allopatric laboratory culture on amoebae." Front. Cell. Inf. Microbio. 2: 91. .

Colson, P., N. Yutin, et al. (2011). "Viruses with more than 1,000 genes: Mamavirus, a new Acanthamoeba polyphaga mimivirus strain, and reannotation of Mimivirus genes." Genome Biol Evol 3: 737-742. http://www.ncbi.nlm.nih.gov/pubmed/21705471.

Edwards, R. A. and F. Rohwer (2005). "Viral metagenomics." Nat Rev Microbiol 3(6): 504-510. http://www.ncbi.nlm.nih.gov/pubmed/15886693.

Filee, J. and M. Chandler (2010). "Gene exchange and the origin of giant viruses." Intervirology 53(5): 354-361. http://www.ncbi.nlm.nih.gov/pubmed/20551687.

Forterre, P. (2010). "Giant viruses: conflicts in revisiting the virus concept." Intervirology 53(5): 362-378. http://www.ncbi.nlm.nih.gov/pubmed/20551688.

Huang, S., K. Wang, et al. (2011). "Genome sequences of siphoviruses infecting marine Synechococcus unveil a diverse cyanophage group and extensive phage-host genetic exchanges." Environ Microbiol. http://www.ncbi.nlm.nih.gov/pubmed/22188618.

Moliner, C., P. E. Fournier, et al. (2010). "Genome analysis of microorganisms living in amoebae reveals a melting pot of evolution." FEMS Microbiol Rev. http://www.ncbi.nlm.nih.gov/pubmed/20132312\.

Moreira, D. and C. Brochier-Armanet (2008). "Giant viruses, giant chimeras: the multiple evolutionary histories of Mimivirus genes." BMC Evol Biol 8: 12. http://www.ncbi.nlm.nih.gov/pubmed/18205905.

Raoult, D. (2010). "Giant viruses from amoeba in a post-Darwinist viral world." Intervirology 53(5): 251-253. http://www.ncbi.nlm.nih.gov/pubmed/20551676.

Raoult, D. and M. Boyer (2010). "Amoebae as genitors and reservoirs of giant viruses." Intervirology 53(5): 321-329. http://www.ncbi.nlm.nih.gov/pubmed/20551684.

Schoenfeld, T., M. Liles, et al. (2010). "Functional viral metagenomics and the next generation of molecular tools." Trends Microbiol 18(1): 20-29. http://www.ncbi.nlm.nih.gov/pubmed/19896852.

Sharon, I., N. Battchikova, et al. (2011). "Comparative metagenomics of microbial traits within oceanic viral communities." Isme J 5(7): 1178-1190. http://www.ncbi.nlm.nih.gov/pubmed/21307954.

Suzan-Monti, M., B. La Scola, et al. (2006). "Genomic and evolutionary aspects of Mimivirus." Virus Res 117(1): 145-155. http://www.ncbi.nlm.nih.gov/pubmed/16181700.

Thompson, L. R., Q. Zeng, et al. (2011). "Phage auxiliary metabolic genes and the redirection of cyanobacterial host carbon metabolism." Proc Natl Acad Sci U S A 108(39): E757-764. http://www.ncbi.nlm.nih.gov/pubmed/21844365.

Zauberman, N., Y. Mutsafi, et al. (2008). "Distinct DNA exit and packaging portals in the virus Acanthamoeba polyphaga mimivirus." PLoS Biol 6(5): e114. http://www.ncbi.nlm.nih.gov/pubmed/18479185.