Table2C(2).DocumentedHorizontalDNATransferEventsintheThreeDomainsofLife.html

Table 2C(2). Documented Horizontal DNA Transfer Events in the Three Domains of Life

Horizontal Transfers

References

Among prokaryotes (bacteria and archaea)

(Sonea and Panisset 1983; Doolittle 1999; Hacker and Carniel 2001; Boucher, Douady et al. 2003; Hacker, Hochhut et al. 2004; Doolittle and Zhaxybayeva 2009; Fournier 2009; Iwasaki and Takagi 2009; Woese and Goldenfeld 2009).

Among eukaryotes

(Rosewich and Kistler 2000; Raymond and Blankenship 2003; Sanders 2006; Opperdoes and Michels 2007; Richardson and Palmer 2007; Gladyshev, Meselson et al. 2008; Lisch 2008; Loreto, Carareto et al. 2008; Alsmark, Sicheritz-Ponten et al. 2009; Andersson 2009; Keeling 2009; Roulin, Piegu et al. 2009; Sanchez 2011)

Eukaryotes to prokaryotes

(Doolittle, Feng et al. 1990; Da Lage, Feller et al. 2004; Rogers, Patron et al. 2007; Anderson and Seifert 2011)

Microbes to multicellular organisms

(Bird and Koltai 2000; Mitreva, Smant et al. 2009; Woolfit, Iturbe-Ormaetxe et al. 2009; Danchin, Rosso et al. 2010; Haegeman, Jones et al. 2011; Jackson, Macis et al. 2011; Richards, Soanes et al. 2011; Keeling, Yuen et al. 2013; Pan, Xu et al. 2013)

REFERENCES

Alsmark, U. C., T. Sicheritz-Ponten, et al. (2009). "Horizontal gene transfer in eukaryotic parasites: a case study of Entamoeba histolytica and Trichomonas vaginalis." Methods Mol Biol 532: 489-500. http://www.ncbi.nlm.nih.gov/pubmed/19271203.

Anderson, M. T. and H. S. Seifert (2011). "Opportunity and means: horizontal gene transfer from the human host to a bacterial pathogen." MBio 2(1). http://www.ncbi.nlm.nih.gov/pubmed/21325040.

Andersson, J. O. (2009). "Horizontal gene transfer between microbial eukaryotes." Methods Mol Biol 532: 473-487. http://www.ncbi.nlm.nih.gov/pubmed/19271202.

Bird, D. M. and H. Koltai (2000). "Plant Parasitic Nematodes: Habitats, Hormones, and Horizontally-Acquired Genes." J Plant Growth Regul 19(2): 183-194. http://www.ncbi.nlm.nih.gov/pubmed/11038227.

Boucher, Y., C. J. Douady, et al. (2003). "Lateral gene transfer and the origins of prokaryotic groups." Annu Rev Genet 37: 283-328. http://www.ncbi.nlm.nih.gov/pubmed/14616063.

Da Lage, J. L., G. Feller, et al. (2004). "Horizontal gene transfer from Eukarya to bacteria and domain shuffling: the alpha-amylase model." Cell Mol Life Sci 61(1): 97-109. http://www.ncbi.nlm.nih.gov/pubmed/14704857.

Danchin, E. G., M. N. Rosso, et al. (2010). "Multiple lateral gene transfers and duplications have promoted plant parasitism ability in nematodes." Proc Natl Acad Sci U S A 107(41): 17651-17656. http://www.ncbi.nlm.nih.gov/pubmed/20876108.

Doolittle, R. F., D. F. Feng, et al. (1990). "A naturally occurring horizontal gene transfer from a eukaryote to a prokaryote." J Mol Evol 31(5): 383-388. http://www.ncbi.nlm.nih.gov/pubmed/2124629.

Doolittle, W. F. (1999). "Lateral genomics." Trends Cell Biol 9(12): M5-8. http://www.ncbi.nlm.nih.gov/pubmed/10611671.

Doolittle, W. F. and O. Zhaxybayeva (2009). "On the origin of prokaryotic species." Genome Res 19(5): 744-756. http://www.ncbi.nlm.nih.gov/pubmed/19411599.

Fournier, G. (2009). "Horizontal gene transfer and the evolution of methanogenic pathways." Methods Mol Biol 532: 163-179. http://www.ncbi.nlm.nih.gov/pubmed/19271184.

Gladyshev, E. A., M. Meselson, et al. (2008). "Massive horizontal gene transfer in bdelloid rotifers." Science 320(5880): 1210-1213. http://www.ncbi.nlm.nih.gov/pubmed/18511688.

Hacker, J. and E. Carniel (2001). "Ecological fitness, genomic islands and bacterial pathogenicity. A Darwinian view of the evolution of microbes." EMBO Rep 2(5): 376-381. http://www.ncbi.nlm.nih.gov/pubmed/11375927.

Hacker, J., B. Hochhut, et al. (2004). "Pathogenomics of mobile genetic elements of toxigenic bacteria." Int J Med Microbiol 293(7-8): 453-461. http://www.ncbi.nlm.nih.gov/pubmed/15149018.

Haegeman, A., J. T. Jones, et al. (2011). "Horizontal gene transfer in nematodes: a catalyst for plant parasitism?" Mol Plant Microbe Interact 24(8): 879-887. http://www.ncbi.nlm.nih.gov/pubmed/21539433.

Iwasaki, W. and T. Takagi (2009). "Rapid pathway evolution facilitated by horizontal gene transfers across prokaryotic lineages." PLoS Genet 5(3): e1000402. http://www.ncbi.nlm.nih.gov/pubmed/19266023.

Jackson, D. J., L. Macis, et al. (2011). "A horizontal gene transfer supported the evolution of an early metazoan biomineralization strategy." BMC Evol Biol 11: 238. http://www.ncbi.nlm.nih.gov/pubmed/21838889.

Keeling, C. I., M. M. Yuen, et al. (2013). "Draft genome of the mountain pine beetle, Dendroctonus ponderosae Hopkins, a major forest pest." Genome Biol 14(3): R27. http://www.ncbi.nlm.nih.gov/pubmed/23537049.

Keeling, P. J. (2009). "Role of horizontal gene transfer in the evolution of photosynthetic eukaryotes and their plastids." Methods Mol Biol 532: 501-515. http://www.ncbi.nlm.nih.gov/pubmed/19271204.

Lisch, D. (2008). "A new SPIN on horizontal transfer." Proc Natl Acad Sci U S A\ 105(44): 16827-16828. http://www.ncbi.nlm.nih.gov/pubmed/18974220%22.

Loreto, E. L., C. M. Carareto, et al. (2008). "Revisiting horizontal transfer of transposable elements in Drosophila." Heredity 100(6): 545-554. http://www.ncbi.nlm.nih.gov/pubmed/18431403%22.

Mitreva, M., G. Smant, et al. (2009). "Role of horizontal gene transfer in the evolution of plant parasitism among nematodes." Methods Mol Biol 532: 517-535. http://www.ncbi.nlm.nih.gov/pubmed/19271205.

Opperdoes, F. R. and P. A. Michels (2007). "Horizontal gene transfer in trypanosomatids." Trends Parasitol 23(10): 470-476. http://www.ncbi.nlm.nih.gov/pubmed/17826337.

Pan, G., J. Xu, et al. (2013). "Comparative genomics of parasitic silkworm microsporidia reveal an association between genome expansion and host adaptation." BMC Genomics 14(1): 186. http://www.ncbi.nlm.nih.gov/pubmed/23496955.

Raymond, J. and R. E. Blankenship (2003). "Horizontal gene transfer in eukaryotic algal evolution." Proc Natl Acad Sci U S A 100(13): 7419-7420. http://www.ncbi.nlm.nih.gov/pubmed/12810941.

Richards, T. A., D. M. Soanes, et al. (2011). "Horizontal gene transfer facilitated the evolution of plant parasitic mechanisms in the oomycetes." Proc Natl Acad Sci U S A 108(37): 15258-15263. http://www.ncbi.nlm.nih.gov/pubmed/21878562.

Richardson, A. O. and J. D. Palmer (2007). "Horizontal gene transfer in plants." J Exp Bot 58(1): 1-9. http://www.ncbi.nlm.nih.gov/pubmed/17030541.

Rogers, M. B., N. J. Patron, et al. (2007). "Horizontal transfer of a eukaryotic plastid-targeted protein gene to cyanobacteria." BMC Biol 5: 26. http://www.ncbi.nlm.nih.gov/pubmed/17584924.

Rosewich, U. L. and H. C. Kistler (2000). "Role of Horizontal Gene Transfer in the Evolution of Fungi." Annu Rev Phytopathol 38: 325-363. http://www.ncbi.nlm.nih.gov/pubmed/11701846.

Roulin, A., B. Piegu, et al. (2009). "Whole genome surveys of rice, maize and sorghum reveal multiple horizontal transfers of the LTR-retrotransposon Route66 in Poaceae." BMC Evol Biol 9: 58. http://www.ncbi.nlm.nih.gov/pubmed/19291296.

Sanchez, C. (2011). "Horizontal gene transfer: eukaryotes under a new light." Nat Rev Microbiol 9(4): 228. http://www.ncbi.nlm.nih.gov/pubmed/21526515.

Sanders, I. R. (2006). "Rapid disease emergence through horizontal gene transfer between eukaryotes." Trends Ecol Evol 21(12): 656-658. http://www.ncbi.nlm.nih.gov/pubmed/17055108.

Sonea, S. and M. Panisset (1983). A New Bacteriology. Boston, Jones and Batlett. .

Woese, C. R. and N. Goldenfeld (2009). "How the microbial world saved evolution from the scylla of molecular biology and the charybdis of the modern synthesis." Microbiol Mol Biol Rev 73(1): 14-21. http://www.ncbi.nlm.nih.gov/pubmed/19258530.

Woolfit, M., I. Iturbe-Ormaetxe, et al. (2009). "An ancient horizontal gene transfer between mosquito and the endosymbiotic bacterium Wolbachia pipientis." Mol Biol Evol 26(2): 367-374. http://www.ncbi.nlm.nih.gov/pubmed/18988686.

Table 2C(2). Documented Horizontal DNA Transfer Events in the Three Domains of Life
Horizontal Transfers	References
Among prokaryotes (bacteria and archaea)	(Sonea and Panisset 1983; Doolittle 1999; Hacker and Carniel 2001; Boucher, Douady et al. 2003; Hacker, Hochhut et al. 2004; Doolittle and Zhaxybayeva 2009; Fournier 2009; Iwasaki and Takagi 2009; Woese and Goldenfeld 2009).
Among eukaryotes	(Rosewich and Kistler 2000; Raymond and Blankenship 2003; Sanders 2006; Opperdoes and Michels 2007; Richardson and Palmer 2007; Gladyshev, Meselson et al. 2008; Lisch 2008; Loreto, Carareto et al. 2008; Alsmark, Sicheritz-Ponten et al. 2009; Andersson 2009; Keeling 2009; Roulin, Piegu et al. 2009; Sanchez 2011)
Eukaryotes to prokaryotes	(Doolittle, Feng et al. 1990; Da Lage, Feller et al. 2004; Rogers, Patron et al. 2007; Anderson and Seifert 2011)
Microbes to multicellular organisms	(Bird and Koltai 2000; Mitreva, Smant et al. 2009; Woolfit, Iturbe-Ormaetxe et al. 2009; Danchin, Rosso et al. 2010; Haegeman, Jones et al. 2011; Jackson, Macis et al. 2011; Richards, Soanes et al. 2011; Keeling, Yuen et al. 2013; Pan, Xu et al. 2013)