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Site-specific Recombination

(Mertens, Klippel et al. 1988; Mertens, Klippel et al. 1988; Landy 1989; Hall and Stokes 1993; Carrasco, Ramaswamy et al. 1994; Hall and Collis 1995; Hallet and Sherratt 1997; Heinrich and Glasgow 1997; Dekkers, Phoelich et al. 1998; Gopaul and Duyne 1999; Van Duyne 2001; Chen and Rice 2003; Lyznik, Gordon-Kamm et al. 2003; Weinacht, Roche et al. 2004; Draper, Cesar et al. 2005; Martinez-Granero, Capdevila et al. 2005; Segall and Craig 2005; Garcia-Otin and Guillou 2006; Grindley, Whiteson et al. 2006; Radman-Livaja, Biswas et al. 2006; Cesar and Llosa 2007; Feil 2007; Grainge, Bregu et al. 2007; Ow 2007; Yano, Garruto et al. 2007; Rashel, Uchiyama et al. 2008; Birling, Gofflot et al. 2009; Chen and Rice 2010; Hallet and Sherratt 2010; Olorunniji and Stark 2010; Smith, Brown et al. 2010; Agundez, Machon et al. 2011; Nern, Pfeiffer et al. 2011)
(Campbell 1976; Smith and Thorpe 2002; Chen and Rice 2003; Weinacht, Roche et al. 2004; Grindley, Whiteson et al. 2006; Campbell 2007; Rice, Mouw et al. 2010)

REFERENCES

 

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Birling, M. C., F. Gofflot, et al. (2009). "Site-specific recombinases for manipulation of the mouse genome." Methods Mol Biol\ 561\: 245-263\. http://www.ncbi.nlm.nih.gov/pubmed/19504076\.

Carrasco, C. D., K. S. Ramaswamy, et al. (1994). "Anabaena xisF gene encodes a developmentally regulated site-specific recombinase." Genes Dev 8(1): 74-83. http://www.ncbi.nlm.nih.gov/pubmed/8288129.

Cesar, C. E. and M. Llosa (2007). "TrwC-mediated site-specific recombination is controlled by host factors altering local DNA topology." J Bacteriol 189(24): 9037-9043. http://www.ncbi.nlm.nih.gov/pubmed/17921309.

Campbell, A. (2007). "Phage integration and chromosome structure. A personal history." Annu Rev Genet 41: 1-11. http://www.ncbi.nlm.nih.gov/pubmed/17474874.

Campbell, A. M. (1976). "How Viruses Insert their DNA into the DNA of the Host Cell." Scientific American 235: 102-113.
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Chen, Y. and P. A. Rice (2003). "New insight into site-specific recombination from Flp recombinase-DNA structures." Annu Rev Biophys Biomol Struct 32: 135-159. http://www.ncbi.nlm.nih.gov/pubmed/12598365.

Chen, Y. and P. A. Rice (2010). "New insight into site-specific recombination from Flp recombinase-DNA structures." Annu Rev Biophys Biomol Struct\ 32\: 135-159\. http://www.ncbi.nlm.nih.gov/pubmed/12598365\.

Dekkers, L. C., C. C. Phoelich, et al. (1998). "A site-specific recombinase is required for competitive root colonization by Pseudomonas fluorescens WCS365." Proc Natl Acad Sci U S A 95(12): 7051-7056. http://www.ncbi.nlm.nih.gov/pubmed/9618537.

Draper, O., C. E. Cesar, et al. (2005). "Site-specific recombinase and integrase activities of a conjugative relaxase in recipient cells." Proc Natl Acad Sci U S A 102(45): 16385-16390. http://www.ncbi.nlm.nih.gov/pubmed/16260740.

Feil, R. (2007). "Conditional somatic mutagenesis in the mouse using site-specific recombinases." Handb Exp Pharmacol\(178\): 3-28\. http://www.ncbi.nlm.nih.gov/pubmed/17203649\.

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Gopaul, D. N. and G. D. Duyne (1999). "Structure and mechanism in site-specific recombination." Curr Opin Struct Biol 9(1): 14-20. http://www.ncbi.nlm.nih.gov/pubmed/10047575.

Grainge, I., M. Bregu, et al. (2007). "Unlinking chromosome catenanes in vivo by site-specific recombination." Embo J\ 26\(19\): 4228-4238\. http://www.ncbi.nlm.nih.gov/pubmed/17805344\.

Grindley, N. D., K. L. Whiteson, et al. (2006). "Mechanisms of site-specific recombination." Annu Rev Biochem 75: 567-605. http://www.ncbi.nlm.nih.gov/pubmed/16756503.

Hall, R. M. and C. M. Collis (1995). "Mobile gene cassettes and integrons: capture and spread of genes by site-specific recombination." Mol Microbiol 15(4): 593-600. http://www.ncbi.nlm.nih.gov/pubmed/7783631.

Hall, R. M. and H. W. Stokes (1993). "Integrons: novel DNA elements which capture genes by site-specific recombination." Genetica 90(2-3): 115-132. http://www.ncbi.nlm.nih.gov/pubmed/8119588.

Hallet, B. and D. J. Sherratt (1997). "Transposition and site-specific recombination: adapting DNA cut-and-paste mechanisms to a variety of genetic rearrangements." FEMS Microbiol Rev 21(2): 157-178. http://www.ncbi.nlm.nih.gov/pubmed/9348666.

Hallet, B. and D. J. Sherratt (2010). "Transposition and site-specific recombination: adapting DNA cut-and-paste mechanisms to a variety of genetic rearrangements." FEMS Microbiol Rev 21(2): 157-178. http://www.ncbi.nlm.nih.gov/pubmed/9348666.

Heinrich, D. W. and A. C. Glasgow (1997). "Transcriptional regulation of type 4 pilin genes and the site-specific recombinase gene, piv, in Moraxella lacunata and Moraxella bovis." J Bacteriol 179(23): 7298-7305. http://www.ncbi.nlm.nih.gov/pubmed/9393693.

Landy, A. (1989). "Dynamic, structural, and regulatory aspects of lambda site-specific recombination." Annu Rev Biochem 58: 913-949. http://www.ncbi.nlm.nih.gov/pubmed/2528323.

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Martinez-Granero, F., S. Capdevila, et al. (2005). "Two site-specific recombinases are implicated in phenotypic variation and competitive rhizosphere colonization in Pseudomonas fluorescens." Microbiology 151(Pt 3): 975-983. http://www.ncbi.nlm.nih.gov/pubmed/15758242.

Mertens, G., A. Klippel, et al. (1988). "Site-specific recombination in bacteriophage Mu: characterization of binding\ sites for the DNA invertase Gin." Embo J\ 7\(4\): 1219-1227\. http://www.ncbi.nlm.nih.gov/pubmed/3042381\.

Mertens, G., A. Klippel, et al. (1988). "Site-specific recombination in bacteriophage Mu: characterization of binding sites for the DNA invertase Gin." EMBO J 7(4): 1219-1227. .

Nern, A., B. D. Pfeiffer, et al. (2011). "Multiple new site-specific recombinases for use in manipulating animal genomes." Proc Natl Acad Sci U S A 108(34): 14198-14203. http://www.ncbi.nlm.nih.gov/pubmed/21831835.

Olorunniji, F. J. and W. M. Stark (2010). "Catalysis of site-specific recombination by Tn3 resolvase." Biochem Soc Trans 38(2): 417-421. http://www.ncbi.nlm.nih.gov/pubmed/20298194.

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Radman-Livaja, M., T. Biswas, et al. (2006). "DNA arms do the legwork to ensure the directionality of lambda site-specific recombination." Curr Opin Struct Biol 16(1): 42-50. http://www.ncbi.nlm.nih.gov/pubmed/16368232.

Rashel, M., J. Uchiyama, et al. (2008). "A novel site-specific recombination system derived from bacteriophage phiMR11." Biochem Biophys Res Commun\ 368\(2\): 192-198\. http://www.ncbi.nlm.nih.gov/pubmed/18211826\.

Rice, P. A., K. W. Mouw, et al. (2010). "Orchestrating serine resolvases." Biochem Soc Trans 38(2): 384-387. http://www.ncbi.nlm.nih.gov/pubmed/20298188.

Segall, A. M. and N. L. Craig (2005). "New wrinkles and folds in site-specific recombination." Mol Cell 19(4): 433-435. http://www.ncbi.nlm.nih.gov/pubmed/16109368.

Smith, M. C., W. R. Brown, et al. (2010). "Site-specific recombination by phiC31 integrase and other large serine recombinases." Biochem Soc Trans 38(2): 388-394. http://www.ncbi.nlm.nih.gov/pubmed/20298189.

Smith, M. C. and H. M. Thorpe (2002). "Diversity in the serine recombinases." Mol Microbiol 44(2): 299-307. http://www.ncbi.nlm.nih.gov/pubmed/11972771.

Van Duyne, G. D. (2001). "A structural view of cre-loxp site-specific recombination." Annu Rev Biophys Biomol Struct 30: 87-104. http://www.ncbi.nlm.nih.gov/pubmed/11340053.

Weinacht, K. G., H. Roche, et al. (2004). "Tyrosine site-specific recombinases mediate DNA inversions affecting the expression of outer surface proteins of Bacteroides fragilis." Mol Microbiol 53(5): 1319-1330. http://www.ncbi.nlm.nih.gov/pubmed/15387812.

Yano, H., C. E. Garruto, et al. (2007). "Complete sequence determination combined with analysis of transposition/site-specific recombination events to explain genetic organization of IncP-7 TOL plasmid pWW53 and related mobile genetic elements." J Mol Biol 369(1): 11-26. http://www.ncbi.nlm.nih.gov/pubmed/17408691.