Evo21 References.shtml

Use And Reuse Of Evolutionary Inventions

(Gould and Vrba 1982; Deschamps and Meijlink 1992; Shu, Luo et al. 1999; Arendt 2003; Conway-Morris 2003; Angelini and Kaufman 2005; Garcia-Fernandez 2005; He and Zhang 2005; Muller and Newman 2005; Peterson and Butterfield 2005; Chourrout, Delsuc et al. 2006; Kamm, Schierwater et al. 2006; Duboule 2007; Larroux, Fahey et al. 2007; Lieberman and Hall 2007; Raff 2007; Stumpf, Kelly et al. 2007; Vannier, Steiner et al. 2007; Wilkins 2007; Bassham, Canestro et al. 2008; Dunne, Williams et al. 2008; Egri-Nagy and Nehaniv 2008; Erwin 2008; Hanada, Zou et al. 2008; Pan and Zhang 2008; Telford, Bourlat et al. 2008; Budd and Telford 2009; Collin, Davies et al. 2009; Collins 2009; Daley, Budd et al. 2009; DeGrasse, DuBois et al. 2009; Erwin 2009; Jovelin 2009; Kholodenko and Birtwistle 2009; Lamb 2009; Larhammar, Nordstrom et al. 2009; Maeda and Karch 2009; Olsson, Hossfeld et al. 2009; Pigliucci 2009; Quiquand, Yanze et al. 2009; Salazar-Ciudad 2009; Shichida and Matsuyama 2009; Shu, Conway Morris et al. 2009; Van der Sloot, Kiel et al. 2009; Xiao and Laflamme 2009; Altay and Emmert-Streib 2010; Beck, Faradji et al. 2010; Cock, Sterck et al. 2010; Conant 2010; Cui, Das et al. 2010; de la Pena and Garcia-Robles 2010; Fain, Hardie et al. 2010; Fernandes, Annibale et al. 2010; Murat, Hopfen et al. 2010; Okada, Sasaki et al. 2010; Rivera, Pankey et al. 2010; Ruiz-Herrera and Ortiz-Castellanos 2010; Sanes and Zipursky 2010; Sebe-Pedros, Roger et al. 2010; Trachana, Jensen et al. 2010; Tuteja and Mehta 2010; van Dijk and van Ham 2010; Xie and Lipke 2010; Foss, Radulovic et al. 2011; Gilbreath, Cody et al. 2011; O'Reilly, Dacks et al. 2011; Ryu, Mavromatis et al. 2011; Serpeloni, Vidal et al. 2011)

Protein and domain families

(Kamesh, Aradhyam et al. 2008; Churcher and Taylor 2009; Kamachi, Iwafuchi et al. 2009; Bridgham, Eick et al. 2010; Desvignes, Pontarotti et al. 2010; Churcher and Taylor 2011; Diekmann, Seixas et al. 2011; Hoglund, Nordstrom et al. 2011)

Evolution and operation of bacterial chemosensing, macromolecular transport and motility systems

(Binet, Letoffe et al. 1997; Kimbrough and Miller 2002; Mattick 2002; Connelly, Young et al. 2004; Delepelaire 2004; Filloux 2004; Jacob-Dubuisson, Fernandez et al. 2004; Sourjik 2004; Christie, Atmakuri et al. 2005; Kollmann, Lovdok et al. 2005; Schulein, Guye et al. 2005; Cornelis 2006; Desvaux and Hebraud 2006; Kentner and Sourjik 2006; Mazar and Cotter 2007; Tomich, Planet et al. 2007; Coulthurst and Palmer 2008; Dehio 2008; Jarrell and McBride 2008; Llosa, Roy et al. 2009; Murray, Kiley et al. 2009; Egelman 2010; Erhardt, Namba et al. 2010; Filloux 2010; Kearns 2010; Masi and Wandersman 2010; Mauriello, Mignot et al. 2010; Rikihisa, Lin et al. 2010; Vayssier-Taussat, Le Rhun et al. 2010; Wallden, Rivera-Calzada et al. 2010; Berleman, Vicente et al. 2011; Engel, Salzburger et al. 2011; Fernandez-Gonzalez, de Paz et al. 2011; Hu, Hossain et al. 2011; Luciano, Agrebi et al. 2011; Nan, Chen et al. 2011; Nan and Zusman 2011; Ramsey, Woodhams et al. 2011; Shelswell and Beatty 2011; Willett and Kirby 2011; Wu, Monchy et al. 2011)

Evolution and operation of microbial virulence

(Kimbrough and Miller 2002; Desvaux and Hebraud 2006; Grant, Fisher et al. 2006; Tamayo, Pratt et al. 2007; Tomich, Planet et al. 2007; Dehio 2008; Kay and Bonas 2009; Lewis, Guttman et al. 2009; Llosa, Roy et al. 2009; Tran Van Nhieu and Arbibe 2009; Boch and Bonas 2010; Vayssier-Taussat, Le Rhun et al. 2010; Baltrus, Nishimura et al. 2011; Cunnac, Chakravarthy et al. 2011; Fernandez-Gonzalez, de Paz et al. 2011; Jackson, Vinatzer et al. 2011; Ramsey, Woodhams et al. 2011; Wu, Monchy et al. 2011)

Hox, butterfly wing pattern determinants, and other higher-level genome complexes

(Keys, Lewis et al. 1999; Papa, Martin et al. 2008; Papa, Morrison et al. 2008; Monteiro and Podlaha 2009; Counterman, Araujo-Perez et al. 2010; d'Alencon, Sezutsu et al. 2010; Matsunami, Sumiyama et al. 2010; Punnamoottil, Herrmann et al. 2010; Conceicao, Long et al. 2011; Jones, Salazar et al. 2011; Joron, Frezal et al. 2011; Merrill, Van Schooten et al. 2011; Reed, Papa et al. 2011; Saenko, Marialva et al. 2011)

Coloration

(Prum, Quinn et al. 2006; Prudic, Oliver et al. 2007; Estrada and Jiggins 2008; Ingram and Parker 2008; Ghiradella and Butler 2009; Shawkey, Morehouse et al. 2009; McNamara, Briggs et al. 2011; McNamara, Briggs et al. 2011)

Eye evolution:

(Tomarev 1997; Tomarev, Callaerts et al. 1997; Keys, Lewis et al. 1999; Wride 2000; Arendt 2003; Nordstrom, Larsson et al. 2004; Gehring 2005; Fernald 2006; Friedrich 2006; Sobierajska, Fabczak et al. 2006; Briggs 2007; Fu and Yau 2007; Lamb, Collin et al. 2007; Briscoe 2008; Jonasova and Kozmik 2008; Kozmik 2008; Kozmik, Ruzickova et al. 2008; Wensel 2008; Arendt, Hausen et al. 2009; Bassnett 2009; Collin, Davies et al. 2009; Cvekl and Wang 2009; Johnson, Bonser et al. 2009; Kusakabe, Takimoto et al. 2009; Lamb 2009; Larhammar, Nordstrom et al. 2009; Nilsson 2009; Parker 2009; Peirson, Halford et al. 2009; Ruzickova, Piatigorsky et al. 2009; Shichida and Matsuyama 2009; Solovei, Kreysing et al. 2009; Solovei, Kreysing et al. 2009; Vopalensky and Kozmik 2009; Yau and Hardie 2009; Burns and Pugh 2010; Collin 2010; Davies, Hankins et al. 2010; Fain, Hardie et al. 2010; Garm and Ekstrom 2010; Hunt, Buch et al. 2010; Karan, Frederick et al. 2010; O'Connor, Garm et al. 2010; Rivera, Pankey et al. 2010; Sanes and Zipursky 2010; Suga, Tschopp et al. 2010; Bassnett, Shi et al. 2011; Passamaneck, Furchheim et al. 2011; Wride 2011)

Vertebrate tooth evolution: (Huysseune, Sire et al. 2009; Fraser, Cerny et al. 2010; Fraser and Smith 2011)

Nervous system evolution

(Mayer and Whitington 2009; Moroz 2009; Whitington and Mayer 2011)

Body plan evolution

(Pueyo and Couso 2005; Telford, Bourlat et al. 2008; Couso 2009; Chipman 2010; Schierwater and Kamm 2010; Cooper, Hu et al. 2011; Liu, Fu et al. 2011; Noordermeer, Leleu et al. 2011; Rosello-Diez, Ros et al. 2011; Schroeder, Greer et al. 2011)

Evolution of larval forms

(Minsuk and Raff 2005; Love and Raff 2006; Raff and Byrne 2006; Smith, Zigler et al. 2007; Love, Lee et al. 2008; Ettensohn 2009; Arenas-Mena 2010; Degnan and Degnan 2010; Maslakova 2010; Minelli 2010; Yankura, Martik et al. 2010; McDougall and Degnan 2011)

Domestication of maize, rice, wheat and other grasses

(Vollbrecht and Sigmon 2005; Londo, Chiang et al. 2006; McSteen 2006; Hufford, Canaran et al. 2007; Komatsuda, Pourkheirandish et al. 2007; Sweeney and McCouch 2007; Weber, Clark et al. 2007; Gallavotti, Yang et al. 2008; Gao and Innan 2008; Izawa, Konishi et al. 2009; Gross and Olsen 2010; Tang, Sezen et al. 2010; Sakuma, Salomon et al. 2011; Studer, Zhao et al. 2011; Tsiantis 2011; van Heerwaarden, Doebley et al. 2011)