[ James A. Shapiro ] James A. Shapiro


Exon formation (exonization)

(Krull, Brosius et al. 2005; Wang, Zheng et al. 2005; Amit, Sela et al. 2007; Lev-Maor, Sorek et al. 2007; Piriyapongsa, Polavarapu et al. 2007; Sorek 2007; Corvelo and Eyras 2008; Moller-Krull, Zemann et al. 2008; Roy, Kim et al. 2008; Schwartz, Gal-Mark et al. 2009; Sorek 2009; Sela, Mersch et al. 2010)

 

REFERENCES

 

Amit, M., N. Sela, et al. (2007). "Biased exonization of transposed elements in duplicated genes: A lesson from the TIF-IA gene." BMC Mol Biol 8: 109. http://www.ncbi.nlm.nih.gov/pubmed/18047649.

Corvelo, A. and E. Eyras (2008). "Exon creation and establishment in human genes." Genome Biol 9(9): R141. http://www.ncbi.nlm.nih.gov/pubmed/18811936.

Krull, M., J. Brosius, et al. (2005). "Alu-SINE exonization: en route to protein-coding function." Mol Biol Evol 22(8): 1702-1711. http://www.ncbi.nlm.nih.gov/pubmed/15901843.

Lev-Maor, G., R. Sorek, et al. (2007). "RNA-editing-mediated exon evolution." Genome Biol 8(2): R29. http://www.ncbi.nlm.nih.gov/pubmed/17326827.

Moller-Krull, M., A. Zemann, et al. (2008). "Beyond DNA: RNA editing and steps toward Alu exonization in primates." J Mol Biol 382(3): 601-609. http://www.ncbi.nlm.nih.gov/pubmed/18680752.

Piriyapongsa, J., N. Polavarapu, et al. (2007). "Exonization of the LTR transposable elements in human genome." BMC Genomics 8: 291. http://www.ncbi.nlm.nih.gov/pubmed/17725822.

Roy, M., N. Kim, et al. (2008). "The effect of intron length on exon creation ratios during the evolution of mammalian genomes." Rna 14(11): 2261-2273. http://www.ncbi.nlm.nih.gov/pubmed/18796579.

Schwartz, S., N. Gal-Mark, et al. (2009). "Alu exonization events reveal features required for precise recognition of exons by the splicing machinery." PLoS Comput Biol 5(3): e1000300. http://www.ncbi.nlm.nih.gov/pubmed/19266014.

Sela, N., B. Mersch, et al. (2010). "Characteristics of transposable element exonization within human and mouse." PLoS One 5(6): e10907. http://www.ncbi.nlm.nih.gov/pubmed/20532223.

Sorek, R. (2007). "The birth of new exons: mechanisms and evolutionary consequences." RNA 13(10): 1603-1608. http://www.ncbi.nlm.nih.gov/pubmed/17709368.

Sorek, R. (2009). "When new exons are born." Heredity\ 103\(4\): 279-280\. http://www.ncbi.nlm.nih.gov/pubmed/19491926\.

Wang, W., H. Zheng, et al. (2005). "Origin and evolution of new exons in rodents." Genome Res 15(9): 1258-1264. http://www.ncbi.nlm.nih.gov/pubmed/16109974.