[ James A. Shapiro ] James A. Shapiro

Ciliate macronuclear development

(Prescott 2000; Betermier 2004; Mochizuki and Gorovsky 2004; Juranek and Lipps 2007; McGrath, Zufall et al. 2007; Aronica, Bednenko et al. 2008; Postberg, Heyse et al. 2008; Ricard, de Graaf et al. 2008; Duharcourt, Lepere et al. 2009; Nowacki, Haye et al. 2010)




Aronica, L., J. Bednenko, et al. (2008). "Study of an RNA helicase implicates small RNA-noncoding RNA interactions in\ programmed DNA elimination in Tetrahymena." Genes Dev\ 22\(16\): 2228-2241\. http://www.ncbi.nlm.nih.gov/pubmed/18708581\.

Betermier, M. (2004). "Large-scale genome remodelling by the developmentally programmed elimination of germ line sequences in the ciliate Paramecium." Res Microbiol 155(5): 399-408. http://www.ncbi.nlm.nih.gov/pubmed/15207872.

Duharcourt, S., G. Lepere, et al. (2009). "Developmental genome rearrangements in ciliates: a natural genomic subtraction mediated by non-coding transcripts." Trends Genet 25(8): 344-350. http://www.ncbi.nlm.nih.gov/pubmed/19596481.

Juranek, S. A. and H. J. Lipps (2007). "New insights into the macronuclear development in ciliates." Int Rev Cytol 262: 219-251. http://www.ncbi.nlm.nih.gov/pubmed/17631190.

McGrath, C. L., R. A. Zufall, et al. (2007). "Variation in macronuclear genome content of three ciliates with extensive chromosomal fragmentation: a preliminary analysis." J Eukaryot Microbiol 54(3): 242-246. http://www.ncbi.nlm.nih.gov/pubmed/17552979.

Mochizuki, K. and M. A. Gorovsky (2004). "Small RNAs in genome rearrangement in Tetrahymena." Curr Opin Genet Dev 14(2): 181-187. http://www.ncbi.nlm.nih.gov/pubmed/15196465.

Nowacki, M., J. E. Haye, et al. (2010). "RNA-mediated epigenetic regulation of DNA copy number." Proc Natl Acad Sci U S A 107(51): 22140-22144. http://www.ncbi.nlm.nih.gov/pubmed/21078984.

Postberg, J., K. Heyse, et al. (2008). "Spatial and temporal plasticity of chromatin during programmed DNA-reorganization in Stylonychia macronuclear development." Epigenetics Chromatin 1(1): 3. http://www.ncbi.nlm.nih.gov/pubmed/19014664.

Prescott, D. M. (2000). "Genome gymnastics: unique modes of DNA evolution and processing in ciliates." Nat Rev Genet 1(3): 191-198. http://www.ncbi.nlm.nih.gov/pubmed/11252748.

Ricard, G., R. M. de Graaf, et al. (2008). "Macronuclear genome structure of the ciliate Nyctotherus ovalis: single-gene chromosomes and tiny introns." BMC Genomics 9: 587. http://www.ncbi.nlm.nih.gov/pubmed/19061489.